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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7153079 chr14:39844308 C/T LOC647288 chr13:75811890-75814517:- -0.54 -9.98 2.03E-21 Box Plot
THCA rs7153413 chr14:39909279 G/A LOC647288 chr13:75811890-75814517:- -0.5 -9.46 1.38E-19 Box Plot
THCA rs71535634 chr7:66313879 T/A CCT6P1 chr7:65216129-65228341:+ 0.44 6.69 6.07E-11 Box Plot
THCA rs71535635 chr7:66313891 T/C CCT6P1 chr7:65216129-65228341:+ 0.43 6.72 5.27E-11 Box Plot
THCA rs71537559 chr6:27309779 G/C ZFP57 chr6:29640169-29648887:- 0.71 7.32 1.07E-12 Box Plot
THCA rs71537572 chr6:27970715 T/C BTN3A2 chr6:26365387-26378548:+ -0.83 -11.56 1.93E-27 Box Plot
THCA rs71537572 chr6:27970715 T/C RNF5P1 chr8:38458179-38458718:- 0.72 6.34 5.41E-10 Box Plot
THCA rs71537572 chr6:27970715 T/C ZFP57 chr6:29640169-29648887:- 0.94 8.9 1.19E-17 Box Plot
THCA rs71538068 chr8:9893251 GAT/G SGK223 chr8:8175258-8244008:- 0.35 6.49 2.21E-10 Box Plot
THCA rs71539747 chr8:11782245 GT/G SGK223 chr8:8175258-8244008:- 0.36 6.61 1.02E-10 Box Plot
THCA rs71539749 chr8:11786877 GC/G SGK223 chr8:8175258-8244008:- -0.44 -8.34 8.15E-16 Box Plot
THCA rs7154155 chr14:66706057 A/G ATP6V1D chr14:67761088-67826982:- 0.42 7.44 4.65E-13 Box Plot
THCA rs71544690 chr6:26584162 CTGGGG/C ZNF322B chr9:99957633-99961910:- 0.66 13.2 3.83E-34 Box Plot
THCA rs71546588 chr6:27971449 GC/G BTN3A2 chr6:26365387-26378548:+ -0.83 -11.56 1.93E-27 Box Plot
THCA rs71546588 chr6:27971449 GC/G RNF5P1 chr8:38458179-38458718:- 0.72 6.34 5.41E-10 Box Plot